DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and hoxb5b

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:100 Identity:38/100 - (38%)
Similarity:51/100 - (51%) Gaps:9/100 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PNQMPKPDVFP-SEELPDSLVMRRP--RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLA 135
            ||....|.:|| ..:|..|..|..|  :|.||.:|..|..|||:.|...||||..|..:::..|.
Zfish   175 PNDGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALC 239

  Fly   136 LGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLS 170
            |...|:||||:|||.:.|      ||...:.|.|:
Zfish   240 LSERQIKIWFQNRRMKWK------KDNKLKSMSLA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 20/46 (43%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 2/6 (33%)
Antp-type hexapeptide 183..188 2/4 (50%)
Homeobox 205..257 CDD:278475 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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