DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bcd and meox2b

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001038589.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:289 Species:Danio rerio


Alignment Length:262 Identity:67/262 - (25%)
Similarity:97/262 - (37%) Gaps:70/262 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HTHTHPHPHSHPHPHSHPHPHHQH-PQ----------LQLP------PQF------------RNP 52
            |...||.|.   ||| ||..|..| ||          |.||      |:.            .||
Zfish    59 HHRVHPAPQ---HPH-HPQHHQWHVPQMPSIESERHGLCLPHPDAAAPELCGTGAGSQGMCAGNP 119

  Fly    53 FDLLFDERTGAI---------NYNYIRPYLPNQMPKPDVFPSEE-LPDSLVMRRPRRTRTTFTSS 107
             .|...:.:|..         |.:.:.|...:...|.|...|:: ...|.|..:||:.||.||..
Zfish   120 -TLTGSDPSGVSCVPGEYGRQNMSPVEPERRSSKGKSDSSDSQDGSYKSDVSSKPRKERTAFTKE 183

  Fly   108 QIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPG 172
            ||.|||..|....|||..|..:::..|.|...|||:||:|||.:.|              .:..|
Zfish   184 QIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK--------------RVKGG 234

  Fly   173 MKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQANRHM 237
            .:.:......|..:..|        |..|:..:|...:  |:  ...:..|.:..|:..|::.|.
Zfish   235 QQGAAAREKELVNVKKG--------TLLPSEFSPMVGL--HH--PIGSPSNEDDSHDSDQSSDHA 287

  Fly   238 HM 239
            |:
Zfish   288 HL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 20/46 (43%)
meox2bNP_001038589.1 Homeobox 177..229 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.