DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and meox2b

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_073787071.1 Gene:meox2b / 566969 ZFINID:ZDB-GENE-060503-853 Length:329 Species:Danio rerio


Alignment Length:262 Identity:67/262 - (25%)
Similarity:97/262 - (37%) Gaps:70/262 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HTHTHPHPHSHPHPHSHPHPHHQH-PQ----------LQLP------PQF------------RNP 52
            |...||.|.   ||| ||..|..| ||          |.||      |:.            .||
Zfish    99 HHRVHPAPQ---HPH-HPQHHQWHVPQMPSIESERHGLCLPHPDAAAPELCGTGAGSQGMCAGNP 159

  Fly    53 FDLLFDERTGAI---------NYNYIRPYLPNQMPKPDVFPSEE-LPDSLVMRRPRRTRTTFTSS 107
             .|...:.:|..         |.:.:.|...:...|.|...|:: ...|.|..:||:.||.||..
Zfish   160 -TLTGSDPSGVSCVPGEYGRQNMSPVEPERRSSKGKSDSSDSQDGSYKSDVSSKPRKERTAFTKE 223

  Fly   108 QIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPG 172
            ||.|||..|....|||..|..:::..|.|...|||:||:|||.:.|              .:..|
Zfish   224 QIRELESEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK--------------RVKGG 274

  Fly   173 MKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQANRHM 237
            .:.:......|..:..|        |..|:..:|...:  |:  ...:..|.:..|:..|::.|.
Zfish   275 QQGAAAREKELVNVKKG--------TLLPSEFSPMVGL--HH--PIGSPSNEDDSHDSDQSSDHA 327

  Fly   238 HM 239
            |:
Zfish   328 HL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 20/46 (43%)
meox2bXP_073787071.1 None

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