Protein Alignment bcd and hoxa1

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 236
• Identity: 65/236 - (27%)
• Similarity: 92/236 - (38%)
• Gaps: 59/236 - (25%)

  Fly     8 QNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYIRPY 72
            |:.|...:..:....|.|......|..:.||.:          .|     |:.....|||.....
 Frog   120 QSVYSGNIASSVVQHHQHQSYIEGSAHYIHHSY----------GP-----DQNISVANYNNNVSS 169

  Fly    73 L----------PNQMPKPDVFPSEELPDSLVMRRPRRT---------------RTTFTSSQIAEL 112
            |          |:....|.  |::......|.|.|.:|               ||.||:.|:.||
 Frog   170 LHISQREVCRSPSSETSPG--PAQTFDWMKVKRNPPKTGKAGEYGFAGQPNTARTNFTTKQLTEL 232

  Fly   113 EQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEG-MPLSPGMKQS 176
            |:.|...:|||..|..:::|.|.|...||||||:|||.:       .|.:..|| :|:||  ..|
 Frog   233 EKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMK-------QKKREKEGLLPISP--SAS 288

  Fly   177 DGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSES 217
            .|.....:.||....::|.|  |||..||     ::|.|.|
 Frog   289 TGSDEKSEELSEKSNSSPCA--PSPASST-----SDHLSTS 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	21/46 (46%)
hoxa1	NP_001008017.1	Homeobox	221..274	CDD:365835	25/59 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910