Protein Alignment bcd and Abd-B

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 322
• Identity: 56/322 - (17%)
• Similarity: 88/322 - (27%)
• Gaps: 153/322 - (47%)

  Fly    25 HSHPHPHSHPHPHHQHPQLQL-------------------------------------------- 45
            :...|..::|:|..|.|..|.
  Fly   273 YDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYE 337

  Fly    46 PPQFRNPFDL--------LFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRT 102
            ||.:.:|..|        .....:|.::...:.|..||    |.:   .|....:.:|:.|:..:
  Fly   338 PPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPN----PGL---HEWTGQVSVRKKRKPYS 395

  Fly   103 TFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGM 167
            .|   |..|||:.||...|::..:..:|:..|.|...||||||:|||.::|..|.:..:|.
  Fly   396 KF---QTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQ---- 453

  Fly   168 PLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHAQ 232
                                                               |...|.:..|||||
  Fly   454 ---------------------------------------------------NNNNNSSSNHNHAQ 467

  Fly   233 ANRHMHMQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQ 294
            |.                                    |.||.|:|:...:......|:..|
  Fly   468 AT------------------------------------QQHHSGHHLNLSLNMGHHAAKMHQ 493

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	19/46 (41%)
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	21/55 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439753
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.930