DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and meox1

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001002450.2 Gene:meox1 / 436723 ZFINID:ZDB-GENE-040718-149 Length:253 Species:Danio rerio


Alignment Length:207 Identity:52/207 - (25%)
Similarity:79/207 - (38%) Gaps:49/207 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PHPHSHPHP---HSHPHPHHQHPQLQLPP-----QFRNP-----------FDLLFDER-TGAINY 66
            |.||::|..   :...|..:|..:.|..|     :.:.|           .|....:| .||:..
Zfish    63 PAPHAYPREDRLYPETHSGYQRTEWQFSPCEPRGRGQEPCQGAAEAVGAEMDSAGGDRLAGAVTG 127

  Fly    67 NYIRPYLPNQMPKPDVFPSE--------ELPDSLVMR----RPRRTRTTFTSSQIAELEQHFLQG 119
            .....|.|..:|..|.....        ::.||....    :.|:.||.||..|:.|||..|...
Zfish   128 CLEGDYSPQSVPAVDTEKKSSKRKREVTDIQDSSFKADSNCKARKERTAFTKEQLRELEAEFTHH 192

  Fly   120 RYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQ 184
            .|||..|..:::..|.|...|||:||:|||.:.|        :...|.|.||...::|       
Zfish   193 NYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK--------RVKGGQPASPHDLEAD------- 242

  Fly   185 TLSLGGGATPNA 196
              .|...|:|::
Zfish   243 --ELDSAASPSS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 19/46 (41%)
meox1NP_001002450.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..158 2/21 (10%)
Homeobox 174..226 CDD:278475 23/51 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..253 9/44 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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