DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bcd and btn

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster


Alignment Length:94 Identity:32/94 - (34%)
Similarity:48/94 - (51%) Gaps:12/94 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YLPNQMPKPDVFPSEELPDSLVMRRP----RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSA 132
            :|.|:.|     ..:|||......|.    |:.||.|:.:|:.:||..|....|||..|..:::.
  Fly    62 WLQNEAP-----TGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAV 121

  Fly   133 KLALGTAQVKIWFKNRR---RRHKIQSDQ 158
            .|.|...|||:||:|||   :|.|::..|
  Fly   122 ALELTERQVKVWFQNRRMKCKRIKLEEQQ 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 19/49 (39%)
btnNP_732768.1 Homeobox 90..142 CDD:278475 21/51 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 1 0.900 - - E2759_KOG0489
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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