Protein Alignment bcd and abd-A

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 348
• Identity: 74/348 - (21%)
• Similarity: 100/348 - (28%)
• Gaps: 172/348 - (49%)

  Fly    39 QHPQLQLPPQFRNPFDLLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRTT 103
            ::|.:.|.....:||     ||....::|.     ||..|:                  ||.|.|
  Fly   368 RYPWMTLTDWMGSPF-----ERVVCGDFNG-----PNGCPR------------------RRGRQT 404

  Fly   104 FTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHK--------IQSDQHK 160
            :|..|..|||:.|....|||..|..:::..|.|...|:||||:|||.:.|        |.....:
  Fly   405 YTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARR 469

  Fly   161 D-QSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNY 224
            | :..|.|.....||.
  Fly   470 DREEQEKMKAQETMKS------------------------------------------------- 485

  Fly   225 NGGHNHAQANRHMHMQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQ 289
                  ||.|:                      |..||||....|||         .|.||.|||
  Fly   486 ------AQQNK----------------------QVQQQQQQQQQQQQ---------QQQQQHQQQ 513

  Fly   290 AQQQQYHHFDFQQKQASACRVLVKDEPEADYNFNSSYYMRSGMSGATASASAVARGAASPGSEVY 354
            .||.|.||                                          |.:|.   :|| .::
  Fly   514 QQQPQDHH------------------------------------------SIIAH---NPG-HLH 532

  Fly   355 EPLTPKNDESPSL---CGIGIGG 374
            ..:..:||....|   .|:|:||
  Fly   533 HSVVGQNDLKLGLGMGVGVGVGG 555

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	19/46 (41%)
abd-A	NP_732176.1	Homeobox	402..454	CDD:278475	22/51 (43%)
		Abdominal-A	456..478	CDD:289192	3/21 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439743
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.830