DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and HOXC8

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens


Alignment Length:177 Identity:43/177 - (24%)
Similarity:70/177 - (39%) Gaps:45/177 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QNFYHH---PLPHTHTHPHPHS-------------HPHPHSHPHPHHQHPQLQLPPQFRNPFDLL 56
            |:|:||   .:.::....:|.|             ...|....:...|...:...|..::..:..
Human    57 QDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTN 121

  Fly    57 FDERTGAINYN--------YIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRTTFTSSQIAELE 113
            ..|..|.:|.|        ::||:.|.:                     |..|.|::..|..|||
Human   122 SSEGQGHLNQNSSPSLMFPWMRPHAPGR---------------------RSGRQTYSRYQTLELE 165

  Fly   114 QHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHK 160
            :.||...|||..|..::|..|.|...||||||:|||.:.|.::::.|
Human   166 KEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDK 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 22/46 (48%)
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 8/60 (13%)
Antp-type hexapeptide 138..143 0/4 (0%)
Homeobox 153..205 CDD:306543 24/51 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 1/7 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.900

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