DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and HOXB2

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_002136.1 Gene:HOXB2 / 3212 HGNCID:5113 Length:356 Species:Homo sapiens


Alignment Length:249 Identity:65/249 - (26%)
Similarity:87/249 - (34%) Gaps:81/249 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNY 68
            |||.:..:....|...|...|.|....       ...|.|..||.                    
Human    46 PPPFEQTFPSLQPGASTLQRPRSQKRA-------EDGPALPPPPP-------------------- 83

  Fly    69 IRPYLPNQMPKPDVFP-------------SEELPDSLVMRRP---------------------RR 99
              |.||...|.|: ||             |...|.......|                     ||
Human    84 --PPLPAAPPAPE-FPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSPADGLGLPEAGGGGARR 145

  Fly   100 TRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSY 164
            .||.:|::|:.|||:.|...:||..||..:::|.|.|...|||:||:|||.:||.|: ||::.. 
Human   146 LRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT-QHREPP- 208

  Fly   165 EGMPLSPGMKQSDGDPPSLQTLSLGGGA---------------TPNALTPSPTP 203
            :|.|..||..:...||......|.||.:               .|.||:..|.|
Human   209 DGEPACPGALEDICDPAEEPAASPGGPSASRAAWEACCHPPEVVPGALSADPRP 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 20/46 (43%)
HOXB2NP_002136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..142 21/125 (17%)
Antp-type hexapeptide 94..99 2/5 (40%)
Homeobox 147..199 CDD:278475 23/51 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..240 14/44 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.900

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