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Protein Alignment bcd and Hoxc5
DIOPT Version :9
Sequence 1: | NP_788587.1 |
Gene: | bcd / 40830 |
FlyBaseID: | FBgn0000166 |
Length: | 494 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001101586.1 |
Gene: | Hoxc5 / 315341 |
RGDID: | 1307584 |
Length: | 222 |
Species: | Rattus norvegicus |
Alignment Length: | 194 |
Identity: | 51/194 - (26%) |
Similarity: | 72/194 - (37%) |
Gaps: | 52/194 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNY 68
||...|..|......:...|| ..|...:...|.|...:.:..| .|| |..:...
Rat 51 PPAPSNSLHGVDMAANPRAHP-DRPACSAAAAPGHALGRDEAAP--LNP---------GMYSQKA 103
Fly 69 IRPYLP----------------------NQMP-KPDVFP-------SEELPDSLVMRRPRRTRTT 103
.||.|. :|.| .|.::| |.|... :|:||:
Rat 104 ARPALEERAKSSGEIKEEQAQTGQPAGLSQPPAPPQIYPWMTKLHMSHETDG-------KRSRTS 161
Fly 104 FTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGM 167
:|..|..|||:.|...||||..|..:::..|.|...|:||||:|||.:.|..| |.:|.|.:
Rat 162 YTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDS---KMKSKEAL 222
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.900 |
|
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