Protein Alignment bcd and hoxd4a

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 210
• Identity: 56/210 - (26%)
• Similarity: 81/210 - (38%)
• Gaps: 45/210 - (21%)

  Fly     4 PPPDQNFYHHPLPHTHTHPHPHSHPHPHS-------HPHPHHQHPQLQLPPQF-----RNPFDLL 56
            |..|.:|.|   |..::..:....|:..|       .|..|.| .|...|..|     :.|...:
Zfish    59 PSQDTDFQH---PGIYSRSNYSEQPYSCSTVQGSSVQPRGHVQ-DQASTPSPFPAQTEQCPAVQI 119

  Fly    57 FDERTGAINYN-YIRPYLPNQMP---------------KPDVFPSEELPDSLVMRRPRRTRTTFT 105
            ...|||....| ..:..:|.:.|               .||....|          |:|:||.:|
Zfish   120 SGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKKVHVTTVNPDYTGPE----------PKRSRTAYT 174

  Fly   106 SSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLS 170
            ..|:.|||:.|...||||..|..:::..|.|...|:||||:|||.:.|   ..||..:.:|...|
Zfish   175 RQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK---KDHKLPNTKGRSAS 236

  Fly   171 PGMKQSDGDPPSLQT 185
            .|.:.:.......||
Zfish   237 VGNQHAQHAQKDSQT 251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	20/46 (43%)
hoxd4a	NP_001119917.1	Homeobox	169..222	CDD:278475	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.900