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Protein Alignment bcd and Gsx1
DIOPT Version :9
Sequence 1: | NP_788587.1 |
Gene: | bcd / 40830 |
FlyBaseID: | FBgn0000166 |
Length: | 494 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178592.1 |
Gene: | Gsx1 / 288457 |
RGDID: | 1310020 |
Length: | 261 |
Species: | Rattus norvegicus |
Alignment Length: | 138 |
Identity: | 45/138 - (32%) |
Similarity: | 63/138 - (45%) |
Gaps: | 22/138 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 77 MPKPDVF-------PSEELPDSLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKL 134
:|.|..| .|.:||.| :|.||.|||:|:.|||:.|....||:..|..:::..|
Rat 125 LPDPRQFHCISVDSSSNQLPSS------KRMRTAFTSTQLLELEREFASNMYLSRLRRIEIATYL 183
Fly 135 ALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGG---GATPNA 196
.|...||||||:|||.:|| .:.|..::.| ..|.....|.|...:..||.. ....:.
Rat 184 NLSEKQVKIWFQNRRVKHK---KEGKGSNHRG---GAGAGAGGGAPQGCKCSSLSSAKCSEDDDE 242
Fly 197 LTPSPTPS 204
|..||:.|
Rat 243 LPMSPSSS 250
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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