DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and mab-5

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_498695.1 Gene:mab-5 / 176091 WormBaseID:WBGene00003102 Length:200 Species:Caenorhabditis elegans


Alignment Length:127 Identity:46/127 - (36%)
Similarity:64/127 - (50%) Gaps:15/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NPFDLLFDERTGAINYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRTTFTSSQIAELEQH 115
            |||.....:.|.| |:...|..:| .:.:| |||..:: ........:|||.|::.||..|||:.
 Worm    75 NPFAYNPLQATSA-NFGETRTSMP-AISQP-VFPWMKM-GGAKGGESKRTRQTYSRSQTLELEKE 135

  Fly   116 FLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSD 177
            |...:|||..|..::|..|.|...||||||:|||.:||      |:...||     |..:||
 Worm   136 FHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHK------KEAKGEG-----GSNESD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 22/46 (48%)
mab-5NP_498695.1 Homeobox 120..173 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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