DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bcd and ceh-12

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_491693.1 Gene:ceh-12 / 172255 WormBaseID:WBGene00000436 Length:180 Species:Caenorhabditis elegans


Alignment Length:60 Identity:29/60 - (48%)
Similarity:41/60 - (68%) Gaps:3/60 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 MRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHK 153
            ||||   ||.|:|.|:.:||:.|...|||:.||...|:.:|:|...|:||||:|||.::|
 Worm   110 MRRP---RTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNK 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 21/46 (46%)
ceh-12NP_491693.1 Homeodomain 111..167 CDD:459649 28/59 (47%)

Return to query results.
Submit another query.