Protein Alignment bcd and Hoxd8

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_032302.2
• Gene: Hoxd8 / 15437
• MGIID: 96209
• Length: 289
• Species: Mus musculus
• Alignment Length: 222
• Identity: 65/222 - (29%)
• Similarity: 83/222 - (37%)
• Gaps: 71/222 - (31%)

  Fly    16 PHTHTHPHPHSHPHP--------------------------HSHPHPHHQHPQLQLPP------- 47
            ||.|.|||||..|.|                          .:.|.|.|..|....||
Mouse    64 PHAHPHPHPHPSPPPGCGGGGGPGPGQDYFHAGAGSPTAAYQAAPPPPHPPPPPPPPPCGGIACH 128

  Fly    48 ----QF-------RNPFDLLFDERTGA--INYNYIRPYLPNQMPKPDVF-----PSEELPDSLVM 94
                :|       |.|   :|..:..|  :.|...:....|....||..     ||:..|    .
Mouse   129 GEPAKFYGYDNLQRQP---IFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFP----W 186

  Fly    95 RRP------RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHK 153
            .||      ||.|.|::..|..|||:.||...|||..|..::|..|||...||||||:|||.:.|
Mouse   187 MRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWK 251

  Fly   154 IQSDQHKDQSYEGMPLSPGMKQSDGDP 180
              .:.:||:.....|     :..||||
Mouse   252 --KENNKDKFPASRP-----EAKDGDP 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	23/46 (50%)
Hoxd8	NP_032302.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	62..125		16/60 (27%)
		COG5576	139..272	CDD:227863	48/147 (33%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	162..184		5/21 (24%)
		Antp-type hexapeptide	183..188		1/8 (13%)
		Homeobox	199..251	CDD:278475	25/51 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	252..289		7/25 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.900