Protein Alignment bcd and Hoxd3

DIOPT Version :9

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_034598.2
• Gene: Hoxd3 / 15434
• MGIID: 96207
• Length: 433
• Species: Mus musculus
• Alignment Length: 324
• Identity: 80/324 - (24%)
• Similarity: 118/324 - (36%)
• Gaps: 87/324 - (26%)

  Fly    22 PHPHSHPHPHSHPHPHHQHPQLQLPPQF-RNPFDLLFDERT-GAIN------------YNYIRPY 72
            |..:|...|...|.|    |...|||.. .||...:..::| |.::            :.:::..
Mouse   108 PGLNSEQQPPQPPPP----PPPTLPPSSPTNPGSGVPAKKTKGGLSASSSSSTISKQIFPWMKES 168

  Fly    73 LPNQMPKPDVFPSEELPDSLVMRRP--RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLA 135
            ..|...|.....|.|..:......|  :|.||.:||:|:.|||:.|...|||..||..:::..|.
Mouse   169 RQNSKQKNSCATSGENCEDKSPPGPASKRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLN 233

  Fly   136 LGTAQVKIWFKNRRRRHKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGA-------- 192
            |...|:||||:|||.::|      |||..:|:..||..:..:..||      |||.|
Mouse   234 LTERQIKIWFQNRRMKYK------KDQKAKGILHSPAGQSPERSPP------LGGAAGHVAYSGQ 286

  Fly   193 ---TPNALTPSPTP-----STPTAHMTEHY---------------SESFNAYYNYNGGHNHAQAN 234
               .|.....:|:|     |.|..:....|               :..|..:...:.|...|.||
Mouse   287 LPPVPGLAYDAPSPPAFAKSQPNMYGLAAYTAPLSSCLPQQKRYPAPEFEPHPMASNGGGFASAN 351

  Fly   235 RHMHMQYPSG---------GGP--------GPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPH 281
            ......|..|         .||        .|.|.:|:   :....|:..:    ||.|...||
Mouse   352 LQGSPVYVGGNFVDSMAPTSGPVFNLGHLSHPSSASVD---YSCAAQIPGN----HHHGPCDPH 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeobox	106..153	CDD:278475	21/46 (46%)
Hoxd3	NP_034598.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	44..198		18/93 (19%)
		Antp-type hexapeptide	161..166		0/4 (0%)
		Homeobox	199..251	CDD:278475	24/51 (47%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	258..280		9/27 (33%)
		DUF4074	370..431	CDD:290032	11/46 (24%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	401..433		4/8 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900