DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and Hoxb5

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:94 Identity:36/94 - (38%)
Similarity:49/94 - (52%) Gaps:9/94 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PDVFP-SEELPDSLVMRRP--RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQV 141
            |.:|| ..:|..|..|..|  :|.||.:|..|..|||:.|...||||..|..:::..|.|...|:
Mouse   174 PQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQI 238

  Fly   142 KIWFKNRRRRHKIQSDQHKDQSYEGMPLS 170
            ||||:|||.:.|      ||...:.|.|:
Mouse   239 KIWFQNRRMKWK------KDNKLKSMSLA 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 20/46 (43%)
Hoxb5NP_032294.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173
Antp-type hexapeptide 176..181 2/4 (50%)
Homeobox 198..251 CDD:365835 24/58 (41%)
PRK07003 <67..>171 CDD:235906
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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