Protein Alignment bcd and Hoxb4

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_034589.3
• Gene: Hoxb4 / 15412
• MGIID: 96185
• Length: 250
• Species: Mus musculus
• Alignment Length: 189
• Identity: 48/189 - (25%)
• Similarity: 69/189 - (36%)
• Gaps: 59/189 - (31%)

  Fly     2 AQPPPDQNFYHHPLPHTHTHPHPHSH---PHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGA 63
            :.|||.      |......||.| ||   ..|..:|.....|                    ...
Mouse   114 SSPPPP------PCAQNPLHPSP-SHSACKEPVVYPWMRKVH--------------------VST 151

  Fly    64 INYNYIRPYLPNQMPKPDVFPSEELPDSLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLA 128
            :|.||                        ....|:|:||.:|..|:.|||:.|...||||..|..
Mouse   152 VNPNY------------------------AGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 192

  Fly   129 DLSAKLALGTAQVKIWFKNRRRR----HKIQSDQHKDQSYEGMPLSPGMKQSDGDPPSL 183
            :::..|.|...|:||||:|||.:    ||:.:.:.:.....|....| ..:.:|.||:|
Mouse   193 EIAHALCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGTAGAAGGP-PGRPNGGPPAL 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/50 (40%)
Hoxb4	NP_034589.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..133		8/25 (32%)
		Antp-type hexapeptide	140..145		1/4 (25%)
		Homeodomain	162..218	CDD:459649	24/55 (44%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..250		7/31 (23%)