Protein Alignment bcd and gbx1

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_777286.1
• Gene: gbx1 / 142985
• ZFINID: ZDB-GENE-020117-2
• Length: 316
• Species: Danio rerio
• Alignment Length: 163
• Identity: 42/163 - (25%)
• Similarity: 60/163 - (36%)
• Gaps: 50/163 - (30%)

  Fly    86 EELPDSLVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRR 150
            :.||......:.||.||.|||.|:.|||:.|...:||:....:.::..|.|...||||||:|||.
Zfish   203 DALPPGGSAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRA 267

  Fly   151 RHK-IQSDQHKDQSYEGMPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHY 214
            :.| |::....::|              |:|.          ..|..:.|.|.
Zfish   268 KWKRIKAGNVNNRS--------------GEPV----------RNPKIVVPIPV------------ 296

  Fly   215 SESFNAYYNYNGGHNHAQANRHMHMQYPSGGGP 247
                         |.:..|.|..|.|...|..|
Zfish   297 -------------HVNRFAVRSQHQQIEPGSRP 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	19/46 (41%)
gbx1	NP_777286.1	Homeodomain	215..271	CDD:459649	25/55 (45%)