DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and LOC11175693

DIOPT Version :10

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_061504020.1 Gene:LOC11175693 / 11175693 VectorBaseID:AGAMI1_013927 Length:667 Species:Anopheles gambiae


Alignment Length:256 Identity:71/256 - (27%)
Similarity:101/256 - (39%) Gaps:67/256 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QNFYHHPLPHTHTHPHPHSHPHPHSHPHPHHQHPQL--QLPPQFR-NPFD--------------- 54
            |...||  ||.| ||| |.|||.|.|.| ||.|..|  |:.|.|. |||.               
Mosquito   408 QQHLHH--PHQH-HPH-HHHPHQHHHQH-HHPHHALHHQVSPHFAGNPFHHHQGQQQQQQQQQQS 467

  Fly    55 -------------------LLFDERTGAINYNYIRPY----LPNQMPKPDVFPSEELPDSLVMRR 96
                               :...::..|.::..:.|:    ..|:....|:.....:..|....:
Mosquito   468 QQQMQQQPSQQHQHLPQHAVAHQQQLAAGHHMALGPHHHGQNHNREKFKDLSKKSAMSSSAASLK 532

  Fly    97 PRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRR---RRHKIQSDQ 158
            .:|.||.||..|:..||..|.:.:|:..|....|:..|.|..||||:||:|||   |:|.::..|
Mosquito   533 SKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLQLTEAQVKVWFQNRRIKWRKHHLEITQ 597

  Fly   159 HK------DQSYEGMPLSPGMKQSDGDPPSLQTL-------SLGGGATPNAL-TPSPTPST 205
            .:      .|...|:|:..|..|    |..:|..       .:.||...||: :|..|..|
Mosquito   598 QRLALIRQRQIANGVPIPAGEVQ----PHHIQQQQQQQQQNGMSGGRIMNAMDSPELTICT 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeodomain 106..153 CDD:459649 19/49 (39%)
LOC11175693XP_061504020.1 None

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