DRSC/TRiP Functional Genomics Resources

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Protein Alignment bcd and mnx1

DIOPT Version :9

Sequence 1:NP_788587.1 Gene:bcd / 40830 FlyBaseID:FBgn0000166 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_002935225.2 Gene:mnx1 / 100496534 XenbaseID:XB-GENE-919890 Length:338 Species:Xenopus tropicalis


Alignment Length:350 Identity:78/350 - (22%)
Similarity:132/350 - (37%) Gaps:101/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPPDQNFYHHPLP---HTHTHP------HPHSHP---------HP------------HSHPHPHH 38
            |.|.:.....|.|   .:|.||      ||.:.|         ||            ..||...:
 Frog    55 PSPPRTCGLVPKPGFLSSHQHPINMMALHPQAAPGIPPQALYGHPMYSYSAAAALAAGQHPALSY 119

  Fly    39 QHPQLQLPPQFRNPFD-LLFDERTGAINYNYIRPYLPNQM-PKPDVFPSEELPDSLVMRRPRRTR 101
            .:||:|......:|.| :.....|..:: .::|......| ||...|.|:  ..|.::.:.||.|
 Frog   120 PYPQMQGAHHAHHPVDPIKISAGTFQLD-QWLRASTAGMMLPKMADFNSQ--AQSNLLGKCRRPR 181

  Fly   102 TTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKDQSYEG 166
            |.|||.|:.|||..|...:||:.|:..:::..|.|...||||||:|||.:.| :|.:.|:|:.: 
 Frog   182 TAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWK-RSKKAKEQAVQ- 244

  Fly   167 MPLSPGMKQSDGDPPSLQTLSLGGGATPNALTPSPTPSTPTAHMTEHYSESFNAYYNYNGGHNHA 231
                        |....|....|          |.....|     |...|..|:|          
 Frog   245 ------------DAEKQQRAGKG----------SCEEKCP-----EELQEDKNSY---------- 272

  Fly   232 QANRHMHMQYPSGGGPGPGSTNVNGGQFFQQQQVHNHQQQLHHQGNHVPHQMQQQQQQAQQQQYH 296
                |:|.:    |.|..|::.:          |.::......:......:.::::...::::::
 Frog   273 ----HLHPR----GDPIKGNSRL----------VRDYSDSEEEEDEEDREEEEEEEGHREEKRFY 319

  Fly   297 HFDFQQKQASACRVLVKDEPEADYN 321
            |      .:|.|   ..:|.|:.:|
 Frog   320 H------HSSDC---TSEEEESSHN 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bcdNP_788587.1 Homeobox 106..153 CDD:278475 20/46 (43%)
mnx1XP_002935225.2 Homeobox 180..234 CDD:395001 25/54 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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