Protein Alignment bcd and hoxa10

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_002933440.2
• Gene: hoxa10 / 100485262
• XenbaseID: XB-GENE-478888
• Length: 359
• Species: Xenopus tropicalis
• Alignment Length: 199
• Identity: 44/199 - (22%)
• Similarity: 66/199 - (33%)
• Gaps: 68/199 - (34%)

  Fly    28 PHPHSHPHPHHQHPQLQLPPQFRNPFDLLFDERTGAINYNYIRPYLPNQ-------------MPK 79
            |..:|.|.|......:.:|..||  ....:....|..|.:.:.|..|.|             :|.
 Frog   152 PRVNSEPSPEQNVGSVPIPGYFR--LSQAYGSSKGYGNGHIVAPQFPAQSQVRFDAPASLSSVPT 214

  Fly    80 PDV------FPSEELP--------------------------DS--------------------- 91
            .:.      .|..:||                          ||
 Frog   215 ENARKESAESPVSKLPVGSQQRREEETLSSSSAAEESSPAPSDSSKHSPGKELVGNAKGDNAATW 279

  Fly    92 LVMRRPRRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQS 156
            |..:..|:.|..:|..|..|||:.||...|||..|..::|..:.|...||||||:|||.:.|..:
 Frog   280 LTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLSDRQVKIWFQNRRMKLKKMN 344

  Fly   157 DQHK 160
            .:::
 Frog   345 RENR 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	21/46 (46%)
hoxa10	XP_002933440.2	Homeodomain	286..342	CDD:459649	24/55 (44%)