Protein Alignment bcd and hoxb2

DIOPT Version :10

• Sequence 1: NP_788587.1
• Gene: bcd / 40830
• FlyBaseID: FBgn0000166
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: XP_012808332.1
• Gene: hoxb2 / 100038155
• XenbaseID: XB-GENE-478525
• Length: 340
• Species: Xenopus tropicalis
• Alignment Length: 241
• Identity: 70/241 - (29%)
• Similarity: 100/241 - (41%)
• Gaps: 60/241 - (24%)

  Fly     4 PPPDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHH---QHPQLQLPPQFRNPFDLLFDERTGAIN 65
            |||    :...:|  ..:|...|...|.|.....:   |.||:| |......|..:.::::...:
 Frog    44 PPP----FEQTIP--SLNPGSDSQIRPKSQKRAENGLLQQPQVQ-PGHLATEFPWMKEKKSAKKS 101

  Fly    66 YNYIRPYLPNQMPKPDVFPSEELPDSLVMRRP---------RRTRTTFTSSQIAELEQHFLQGRY 121
                     :|.....:.|..|.........|         ||.||.:|::|:.|||:.|...:|
 Frog   102 ---------SQGSPQALIPPPESAGGSPAEPPGLHDAGGGSRRLRTAYTNTQLLELEKEFHFNKY 157

  Fly   122 LTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSDQHKD-----QSY----EGMPLSPGMKQSD 177
            |..||..:::|.|.|...|||:||:|||.:||.|: ||||     .||    :|.||..|    |
 Frog   158 LCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQT-QHKDSQDGEHSYSNPEDGEPLDDG----D 217

  Fly   178 GDPPSLQTLSLGGG------------ATPNA--LTPS----PTPST 205
            ..|...|.|.....            |.|::  ||||    |||:|
 Frog   218 DSPVYHQGLDSNDSLREQEIRKDPSTAMPSSKELTPSSPLYPTPTT 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bcd	NP_788587.1	Homeodomain	106..153	CDD:459649	20/46 (43%)
hoxb2	XP_012808332.1	Homeodomain	134..190	CDD:459649	26/55 (47%)