DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and HB5

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_201334.1 Gene:HB5 / 836656 AraportID:AT5G65310 Length:312 Species:Arabidopsis thaliana


Alignment Length:329 Identity:71/329 - (21%)
Similarity:116/329 - (35%) Gaps:93/329 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPN-----HDSQRVKLKRSRTAFTS 99
            ||.......|::..|||.....|....:.|...:.|:..|..:     |.|.....|:.|.....
plant    16 PIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQ 80

  Fly   100 VQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRR---------------------- 142
            |:  .||..|:.:..|...|::::||.|.|..|||.|||||||                      
plant    81 VK--ALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDAL 143

  Fly   143 --------------------MKFKKDIQGHREPKSNAKLAQPQAEQS----------AHRGIVKR 177
                                :|.|.:::|.:..:.|..|...:|.||          :||     
plant   144 KRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEVLELSHR----- 203

  Fly   178 LMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTT 242
              |.|..|...|.|........:..:.|:     ::..:.:.:.::.  |||.|:|  |:...|.
plant   204 --SPSPPPHIPTDAPTSELAFEMFSIFPR-----TENFRDDPADSSD--SSAVLNE--EYSPNTV 257

  Fly   243 AAPQVSTATSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLEAAAQAWSKSKSAPILA-TQSWH 306
            .|.....||        :...|:.|.:|       |.:|  :|.....:|..::..:.| .:.|:
plant   258 EAAGAVAAT--------TVEMSTMGCFS-------QFVK--MEEHEDLFSGEEACKLFADNEQWY 305

  Fly   307 PSSQ 310
            .|.|
plant   306 CSDQ 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 23/97 (24%)
HB5NP_201334.1 Homeodomain 72..125 CDD:459649 22/54 (41%)
HALZ 127..168 CDD:460477 1/40 (3%)

Return to query results.
Submit another query.