DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and HB-3

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_568309.2 Gene:HB-3 / 831367 AraportID:AT5G15150 Length:314 Species:Arabidopsis thaliana


Alignment Length:303 Identity:72/303 - (23%)
Similarity:111/303 - (36%) Gaps:89/303 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 HHDVNPIGLPP-----------NYNQMNSNP--TTLNDHCSPQHVHQQHVSSDENLPSQP----- 81
            ||..:|..||.           || .||.:.  |.::||   .|:.|:..::..|:..|.     
plant    40 HHLPSPTSLPSCPPHLFYGGGGNY-MMNRSMSFTGVSDH---HHLTQKSPTTTNNMNDQDQVGEE 100

  Fly    82 ---NHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRM 143
               :.|...:.|...:......|:..||..|:....|...|::::|:.|.|..||:.|||||||.
plant   101 DNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRA 165

  Fly   144 KFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPD 208
            ::|.. |..|:..|                 :|:.....:...:...|..|: :.|......|.|
plant   166 RWKTK-QLERDYDS-----------------LKKQFDVLKSDNDSLLAHNKK-LHAELVALKKHD 211

  Fly   209 YQASQKMK---TEAS-TNNGMCSSADLSEILEHLAQTTAAPQVSTATSSTGTSTNSASSSSSGHY 269
            .:.|.|:|   .||| :|||                            ||..:.|: :||.:.|.
plant   212 RKESAKIKREFAEASWSNNG----------------------------STENNHNN-NSSDANHV 247

  Fly   270 SYNVDLVLQSIKQDLEAAAQAWSKSKSAPILATQSWHPSSQSQ 312
            |...||...||            :|.:|...:|...|...|.|
plant   248 SMIKDLFPSSI------------RSATATTTSTHIDHQIVQDQ 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 18/55 (33%)
HB-3NP_568309.2 Homeodomain 115..168 CDD:459649 18/52 (35%)
HALZ 170..208 CDD:460477 7/56 (13%)

Return to query results.
Submit another query.