Protein Alignment zen and Hoxa5

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_077365.1
• Gene: Hoxa5 / 79241
• RGDID: 620609
• Length: 381
• Species: Rattus norvegicus
• Alignment Length: 177
• Identity: 62/177 - (35%)
• Similarity: 80/177 - (45%)
• Gaps: 48/177 - (27%)

  Fly    19 SADPSEVKYSDLIYGHHHDVNPIGLP-------PNYNQMNSNPTTL-NDHCSPQHVHQQHVSSDE 75
            ||.|:|.:||..... .|...|..||       |..:..:....:| |...:..:....|:||.|
  Rat   189 SAAPAEPRYSQPATS-THSPPPDPLPCSAVAPSPGSDSHHGGKNSLGNSSGASANAGSTHISSRE 252

  Fly    76 NL---------------------------PSQP-----------NHDS-QRVKLKRSRTAFTSVQ 101
            .:                           |:||           :||: ...:.||:|||:|..|
  Rat   253 GVGTASAAEEDAPASSEQAGAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQ 317

  Fly   102 LVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD 148
            .:|||.||..|.||.|.||||||..|.|.|||:||||||||||:|||
  Rat   318 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	37/55 (67%)
Hoxa5	NP_077365.1	Homeodomain	307..363	CDD:459649	37/55 (67%)