DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and Nkx6-3

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_083278.1 Gene:Nkx6-3 / 74561 MGIID:1921811 Length:262 Species:Mus musculus


Alignment Length:208 Identity:57/208 - (27%)
Similarity:85/208 - (40%) Gaps:39/208 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSVMHYYPVHQAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLNDHCSPQHV 66
            ||::..|| |.|..|..|:       ..:.||..     :|   ::::..:...|...:|... .
Mouse    68 SSLLSGYP-HVAGFGGLSS-------QGVYYGPQ-----VG---SFSKAGNEYPTRTRNCWAD-T 115

  Fly    67 HQQHVSSDENLPSQPNHDSQRV-KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLC 130
            .|....|.....:.|:..|..: |.|.:|..||..|:..||..|:...||....|..:|..|.:.
Mouse   116 GQDWRGSARPCSNTPDPLSDTIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMT 180

  Fly   131 ERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKR 195
            |.|||:||||||.|::|  :...||.|:.    |:|...|           |.|    .||:|..
Mouse   181 ESQVKVWFQNRRTKWRK--KSALEPSSST----PRAPGGA-----------SGD----RAASENE 224

  Fly   196 PMMAVAPVNPKPD 208
            ......|::|..|
Mouse   225 DDEYNKPLDPDSD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 24/55 (44%)
Nkx6-3NP_083278.1 Homeodomain 139..197 CDD:459649 25/57 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..237 14/60 (23%)

Return to query results.
Submit another query.