Protein Alignment zen and Hoxa6

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 151
• Identity: 52/151 - (34%)
• Similarity: 68/151 - (45%)
• Gaps: 47/151 - (31%)

  Fly     5 MHYYPVHQAKVGSYSA-------DPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLNDHCS 62
            :|:.|..|.|..|.|.       :.::.||:..:|            |...:|||        |:
  Rat   103 LHFSPEQQYKPDSSSVQGKALHEEGTDRKYTSPVY------------PWMQRMNS--------CA 147

  Fly    63 PQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRL 127
            .. |:..|.                   :|.|..:|..|.:|||.||..|.||.|.||||||..|
  Rat   148 GA-VYGSHG-------------------RRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANAL 192

  Fly   128 SLCERQVKIWFQNRRMKFKKD 148
            .|.|||:||||||||||:||:
  Rat   193 CLTERQIKIWFQNRRMKWKKE 213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	34/55 (62%)
Hoxa6	NP_001178016.1	Homeodomain	156..212	CDD:459649	34/55 (62%)