Protein Alignment zen and Nkx6-3

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001102925.1
• Gene: Nkx6-3 / 685102
• RGDID: 1597780
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 57/208 - (27%)
• Similarity: 85/208 - (40%)
• Gaps: 39/208 - (18%)

  Fly     2 SSVMHYYPVHQAKVGSYSADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLNDHCSPQHV 66
            ||::..|| |.|..|..|:       ..:.||..     :|   ::::..:...|...:|... .
  Rat    68 SSLLSGYP-HVAGFGGLSS-------QGVYYGPQ-----VG---SFSKTGNEYPTRTRNCWAD-T 115

  Fly    67 HQQHVSSDENLPSQPNHDSQRV-KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLC 130
            .|....|.....:.|:..|..: |.|.:|..||..|:..||..|:...||....|..:|..|.:.
  Rat   116 GQDWRGSTRPCSNTPDPLSDTIHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMT 180

  Fly   131 ERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKR 195
            |.|||:||||||.|::|  :...||.|:.    |:|...|           |.|    .||:|..
  Rat   181 ESQVKVWFQNRRTKWRK--KSALEPSSST----PRAPGGA-----------SGD----RAASENE 224

  Fly   196 PMMAVAPVNPKPD 208
            ......|::|..|
  Rat   225 DDEYNKPLDPDSD 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	24/55 (44%)
Nkx6-3	NP_001102925.1	Homeodomain	139..197	CDD:459649	25/57 (44%)