DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxc12b

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571620.1 Gene:hoxc12b / 58062 ZFINID:ZDB-GENE-000329-17 Length:283 Species:Danio rerio


Alignment Length:67 Identity:33/67 - (49%)
Similarity:44/67 - (65%) Gaps:4/67 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 PNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKF 145
            |.|...|.|    |..::.:||.|||.||..|.::.|.||.|::.||:|.::||||||||||||.
Zfish   210 PMHRQTRKK----RKPYSKLQLNELEGEFILNEFITRQRRRELSDRLNLTDQQVKIWFQNRRMKK 270

  Fly   146 KK 147
            |:
Zfish   271 KR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
hoxc12bNP_571620.1 Homeodomain 216..272 CDD:459649 30/59 (51%)

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