DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxb6b

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571613.1 Gene:hoxb6b / 58053 ZFINID:ZDB-GENE-000823-7 Length:224 Species:Danio rerio


Alignment Length:111 Identity:43/111 - (38%)
Similarity:63/111 - (56%) Gaps:12/111 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTR 119
            :|.:..|:|.:...|.::|...:|....        :|.|..:|..|.:|||.||..|.||.|.|
Zfish   120 STEDKPCTPVYPWMQRMNSCNGMPGSTG--------RRGRQTYTRFQTLELEKEFHFNRYLTRRR 176

  Fly   120 RIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQ 165
            ||||:..|.|.|||:||||||||||:||:    .:..::||::..:
Zfish   177 RIEISHALCLTERQIKIWFQNRRMKWKKE----NKAVNSAKVSDEE 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 33/55 (60%)
hoxb6bNP_571613.1 Antp-type hexapeptide 129..134 0/4 (0%)
Homeodomain 148..204 CDD:459649 33/55 (60%)

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