DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxa3a

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_571609.2 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:410 Species:Danio rerio


Alignment Length:368 Identity:94/368 - (25%)
Similarity:131/368 - (35%) Gaps:134/368 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PPNYNQMNSNPTTLND------------HCSPQHVHQQHV------------------------S 72
            ||......|:|::||.            |.||....::|:                        :
Zfish    88 PPTAPSGPSSPSSLNQIPNIDSAAKNPVHVSPTPSTRKHIFPWMKESRQNTKQKSCSIISVESCA 152

  Fly    73 SDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIW 137
            .|::.|..       ...||:|||:||.||||||.||..|.||.|.||:|:|..|:|.|||:|||
Zfish   153 GDKSPPGS-------AASKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIW 210

  Fly   138 FQNRRMKFKKDIQ--------GHREPKSNAKLAQ------PQAEQSAHRGIVKRLMSYSQDPREG 188
            |||||||:|||.:        |.:.|.|...|:.      ..|..|:...:|..:...|..|   
Zfish   211 FQNRRMKYKKDQKGLGMMPSPGAQSPHSPVSLSSGGGGGGGSAYLSSMHSLVNSVTYDSPSP--- 272

  Fly   189 TAAAEKRPM-------MAVAPVN----PKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTT 242
              |:..:|.       .:..|:|    |:..||.:                            .|
Zfish   273 --ASYNKPQSNTYSLPTSYPPLNNCPPPQKRYQGT----------------------------GT 307

  Fly   243 AAPQVST----ATSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLEAAAQAWSKSKSAPILA-T 302
            |.|:..|    ..::.||....:....||...|:..||                 ...|.:.. |
Zfish   308 ATPEYDTHHIQGNNNYGTQVQGSPVYVSGGGGYSDSLV-----------------GMGASVFGLT 355

  Fly   303 QSWHPSSQSQVPTSVHAAPSMNLSWGEPAAKSRKLSVNHMNPC 345
            ...||   ||.....:.|.:|..|..:.|..|        |||
Zfish   356 HLPHP---SQGNIDYNGAITMGNSHQQGACDS--------NPC 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 38/55 (69%)
hoxa3aNP_571609.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126 9/37 (24%)
Antp-type hexapeptide 127..132 0/4 (0%)
Homeodomain 164..220 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..249 4/26 (15%)
DUF4074 346..408 CDD:463833 14/53 (26%)

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