Protein Alignment zen and hoxc9a

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_571603.3
• Gene: hoxc9a / 58043
• ZFINID: ZDB-GENE-000328-5
• Length: 270
• Species: Danio rerio
• Alignment Length: 181
• Identity: 62/181 - (34%)
• Similarity: 84/181 - (46%)
• Gaps: 39/181 - (21%)

  Fly     2 SSVMHYYPVHQAKVGSYS--------ADPSEVKYSDLIYGHHHDVNPIGLPPNYNQ-------MN 51
            |||:::...||..:|:.|        ..|..|.:.    |:..:....||.|:..|       :.
Zfish    83 SSVVYHPYTHQPHLGTDSRYVRSWLEPIPGTVSFP----GYAGNSRHYGLKPDTFQDPRAGDCLG 143

  Fly    52 SNPTTLND--HCSPQHVH--QQHVSSDENLP-SQPNHDSQRVKL---------------KRSRTA 96
            ||..|..|  :||...:.  ||:..|.|... |...|...:.:|               ::.|..
Zfish   144 SNGRTYTDYLYCSAVDIREKQQNTPSPETESLSSGKHKDDKAELDPNNPVANWIHARSTRKKRCP 208

  Fly    97 FTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKK 147
            :|..|.:|||.||..||||.|.||.|:|:.|:|.||||||||||||||.||
Zfish   209 YTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	33/55 (60%)
hoxc9a	NP_571603.3	Hox9_act	11..189	CDD:461369	27/109 (25%)
		Homeodomain	203..251	CDD:459649	26/47 (55%)