Protein Alignment zen and msx2a

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001025440.1
• Gene: msx2a / 573620
• ZFINID: ZDB-GENE-980526-322
• Length: 257
• Species: Danio rerio
• Alignment Length: 162
• Identity: 43/162 - (26%)
• Similarity: 69/162 - (42%)
• Gaps: 30/162 - (18%)

  Fly    46 NYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFK 110
            |..:::::|.:.:....|...|:.:                    ::.||.||:.||:.||.:|:
Zfish    98 NKPRLSTSPRSQSPTICPLRKHKTN--------------------RKPRTPFTTAQLLALERKFR 142

  Fly   111 SNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIV 175
            ...||....|.|.:..|||.|.||||||||||.|.|:..:...|   ..|:|   ::...|.|:.
Zfish   143 QKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELE---RFKMA---SKPILHPGLT 201

  Fly   176 KRLMSYSQDPREGTAAAEKRP----MMAVAPV 203
            ......:|.........:..|    |:..||:
Zfish   202 LPFPLCTQPQTAALVCGQSFPFSRHMLPFAPI 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	28/55 (51%)
msx2a	NP_001025440.1	Homeodomain	123..179	CDD:459649	28/55 (51%)