DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and barhl1a

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001017712.3 Gene:barhl1a / 550407 ZFINID:ZDB-GENE-050417-212 Length:299 Species:Danio rerio


Alignment Length:137 Identity:43/137 - (31%)
Similarity:63/137 - (45%) Gaps:8/137 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SADPSEVKYSDLIYGHHHDVNPIGLPPNYNQMNSNPTTLND-----HCSPQHVHQQHVSSDENLP 78
            |..|..|..|.||.....|..|:.....|:....:.....|     |.:.....:..|..:.:..
Zfish    76 SQQPRTVTSSFLIRDILADCKPLAACAPYSSTGQSAQDAEDCMDKLHSNSSSDSEYRVKDEADRE 140

  Fly    79 SQPNHDSQRVKLK---RSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQN 140
            ...:.||...:||   ::|||||..||.:||..|:...||....|:|:|..|:|.:.|||.|:||
Zfish   141 ISSSRDSPNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 205

  Fly   141 RRMKFKK 147
            ||.|:|:
Zfish   206 RRTKWKR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 27/58 (47%)
barhl1aNP_001017712.3 None

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