DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxc9

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001017256.1 Gene:hoxc9 / 550010 XenbaseID:XB-GENE-482330 Length:100 Species:Xenopus tropicalis


Alignment Length:79 Identity:39/79 - (49%)
Similarity:47/79 - (59%) Gaps:11/79 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREP 155
            ::.|..:|..|.:|||.||..||||.|.||.|:|:.|:|.||||||||||||||.||        
 Frog    33 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKK-------- 89

  Fly   156 KSNAKLAQPQAEQS 169
               ....:|..|||
 Frog    90 ---MNKEKPDKEQS 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 33/55 (60%)
hoxc9NP_001017256.1 Homeodomain 33..81 CDD:459649 26/47 (55%)

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