DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hoxd1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001016678.1 Gene:hoxd1 / 549432 XenbaseID:XB-GENE-482731 Length:301 Species:Xenopus tropicalis


Alignment Length:142 Identity:53/142 - (37%)
Similarity:71/142 - (50%) Gaps:18/142 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DVNPIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLKRS-------- 93
            :|.|.|   |...::.:|.|.....||  ....|||:.:.:..:.|...:.::.:..        
 Frog   147 EVYPGG---NLQSISPSPGTYPKPASP--ASDTHVSTFDWMKVKRNPPKKSLQSEYGVASPPCTV 206

  Fly    94 RTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSN 158
            ||.||:.||.|||.||..|.||.|.||||||..|.|.:.||||||||||||.||     ||.:.:
 Frog   207 RTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQLNDTQVKIWFQNRRMKQKK-----REREGS 266

  Fly   159 AKLAQPQAEQSA 170
            ...:.|....|:
 Frog   267 LPNSPPSGPASS 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 35/63 (56%)
hoxd1NP_001016678.1 Antp-type hexapeptide. /evidence=ECO:0000255 178..183 0/4 (0%)
Homeodomain 207..260 CDD:459649 35/52 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..301 9/29 (31%)

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