Protein Alignment zen and nkx3.3

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 178
• Identity: 55/178 - (30%)
• Similarity: 77/178 - (43%)
• Gaps: 31/178 - (17%)

  Fly    49 QMNSNPTTLNDHCSPQH-VHQQHVSSDENLPSQPNHDSQRVK--------------LKRSRTAFT 98
            :::|....|....|.|| ..::....|.:|..:.:|:..:.|              .||||.||:
Zfish    55 RISSCVLVLESLSSDQHSCEEESTGEDNSLERRHDHEMDQQKPQSCSFEDSNPKSSKKRSRAAFS 119

  Fly    99 SVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQ 163
            ..|:.|||..|....||....|.::|..|.|.|.||||||||||.|.|:       .:..|:||.
Zfish   120 HAQVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKR-------RQMAAELAT 177

  Fly   164 PQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQA 211
            ......|.|..||.|:  ..|.|:..  .|..|..:|.|:     ||:
Zfish   178 TPTTTLAKRVAVKVLV--RNDQRQYN--TEDLPSPSVPPL-----YQS 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	29/55 (53%)
nkx3.3	NP_001013342.2	Homeodomain	112..168	CDD:459649	29/55 (53%)