DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Lbx1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001040573.1 Gene:Lbx1 / 499362 RGDID:1564197 Length:285 Species:Rattus norvegicus


Alignment Length:152 Identity:45/152 - (29%)
Similarity:66/152 - (43%) Gaps:31/152 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHR 153
            |.::||||||:.|:.|||..|....||....|.:|||:|.|...||..||||||.|.|:|::..:
  Rat   124 KRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMK 188

  Fly   154 EPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPRE----------GTAAAEKRP------------ 196
            ....:||...|..:..     :..|....|:...          |...|:.||            
  Rat   189 ADVESAKKLGPSGQMD-----IVALAELEQNSEASGGGGGGGGGGCGRAKSRPGSPALPPGAPQA 248

  Fly   197 ----MMAVAPVNPKPDYQASQK 214
                .:.::|.:|..|.:||.:
  Rat   249 PGGGPLQLSPASPLTDQRASSQ 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
Lbx1NP_001040573.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Homeodomain 126..182 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..285 10/59 (17%)
Blue background indicates that the domain is not in the aligned region.

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