Protein Alignment zen and hoxa1

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 276
• Identity: 73/276 - (26%)
• Similarity: 105/276 - (38%)
• Gaps: 103/276 - (37%)

  Fly     7 YYPVHQ-AKVGS------YSADPSEVKYSDLIYGH-------------HHDVNPIGLPPNYNQMN 51
            ::|::| |.|.:      ||.:.:    |.::..|             ||...|        ..|
 Frog   105 HFPINQEADVSAGFPQSVYSGNIA----SSVVQHHQHQSYIEGSAHYIHHSYGP--------DQN 157

  Fly    52 SNPTTLNDHCSPQHVHQQHV---SSDENLPSQPNHDSQRVKLKR-------------------SR 94
            .:....|::.|..|:.|:.|   .|.|..|. |......:|:||                   :|
 Frog   158 ISVANYNNNVSSLHISQREVCRSPSSETSPG-PAQTFDWMKVKRNPPKTGKAGEYGFAGQPNTAR 221

  Fly    95 TAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNA 159
            |.||:.||.|||.||..|.||.|.||:|||..|.|.|.||||||||||||.||     ||
 Frog   222 TNFTTKQLTELEKEFHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKK-----RE----- 276

  Fly   160 KLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKM-KTEASTNN 223
                                      :||           :.|::|.....:.:|. :....:|:
 Frog   277 --------------------------KEG-----------LLPISPSASTGSDEKSEELSEKSNS 304

  Fly   224 GMCSSADLSEILEHLA 239
            ..|:.:..|...:||:
 Frog   305 SPCAPSPASSTSDHLS 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	37/74 (50%)
hoxa1	NP_001008017.1	Homeodomain	221..274	CDD:459649	35/52 (67%)