DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and hbn

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_788420.1 Gene:hbn / 47894 FlyBaseID:FBgn0008636 Length:409 Species:Drosophila melanogaster


Alignment Length:401 Identity:94/401 - (23%)
Similarity:139/401 - (34%) Gaps:132/401 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVMHYYPVHQAKVGS----YSAD--------------PSEVKYSDLIYGHHHDVNPIGLPPNY 47
            |...|...||.::.|..    ||.|              ||||..:...:||.|.::      :.
  Fly    16 MPPAMRPAPVQESPVSRPRAVYSIDQILGNQHQIKRSDTPSEVLITHPHHGHPHHIH------HL 74

  Fly    48 NQMNSNPTT-LNDHCSPQHVHQQH-----------------------------VSSDENLPSQPN 82
            :..|||.:. |:.....||..|||                             |.:|:.|.|..|
  Fly    75 HSSNSNGSNHLSHQQQQQHSQQQHHSQQQQQQQQLQVQAKREDSPTNTDGGLDVDNDDELSSSLN 139

  Fly    83 H-----DSQRV-KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNR 141
            :     |.:|. |::||||.||:.||.:||..|:...|.....|.::|.||.|.|.:|::|||||
  Fly   140 NGHDLSDMERPRKVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDLSEARVQVWFQNR 204

  Fly   142 RMKFKK-------DIQGHREPKSNAK-----LAQPQAEQSAHRGIVKRLMSYSQDPR-------- 186
            |.|::|       |..|:..|:....     :..|......|.|   .:.|....|.        
  Fly   205 RAKWRKREKFMNQDKAGYLLPEQGLPEFPLGIPLPPHGLPGHPG---SMQSEFWPPHFALHQHFN 266

  Fly   187 -EGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEASTNNGMCSSADLSEILEHLAQTTAAPQVSTA 250
             ...|||...|...:||....|::..........|..||:                         
  Fly   267 PAAAAAAGLLPQHLMAPHYKLPNFHTLLSQYMGLSNLNGI------------------------- 306

  Fly   251 TSSTGTSTNSASSSSSGHYSYNVDLVLQSIKQDLEAAAQ-----AWSKSKSAPILATQSWHPSSQ 310
               .|....:|::::|..|..|:     |:...|.|.:|     :.|..:.:|.|...       
  Fly   307 ---FGAGAAAAAAAASAGYPQNL-----SLHAGLSAMSQVSPPCSNSSPRESPKLVPH------- 356

  Fly   311 SQVPTSVHAAP 321
               ||..||.|
  Fly   357 ---PTPPHATP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 26/55 (47%)
hbnNP_788420.1 Homeodomain 154..210 CDD:459649 26/55 (47%)

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