DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zen and lbl

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster


Alignment Length:169 Identity:47/169 - (27%)
Similarity:68/169 - (40%) Gaps:45/169 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NQMNSNPTTLNDHCSPQHVHQQHVSSDEN---LP-----SQP---------------------NH 83
            :|.:|:.....:.|||....:....|.|:   :|     .||                     |.
  Fly   166 SQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNF 230

  Fly    84 DSQR--------------VKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQV 134
            |.::              .|.::||||||:.|:.|||..|....||....|.|||..|.|...||
  Fly   231 DEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQV 295

  Fly   135 KIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAE--QSAH 171
            ..||||||.|.|:|::..::.....|:....|:  :|.|
  Fly   296 ITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHH 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 28/55 (51%)
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/125 (30%)
Homeodomain 252..308 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.