Protein Alignment zen and cdx1a

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 144
• Identity: 47/144 - (32%)
• Similarity: 69/144 - (47%)
• Gaps: 20/144 - (13%)

  Fly    31 IYGH---HHDVNPIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLK- 91
            :|||   |      .||.|..:::..|:......|...|.::.........:.|.:...:.:.|
Zfish    72 LYGHGTGH------SLPANGVEVSVLPSVDQGLLSGAPVDREEPQDWMRRSAVPTNPGGKTRTKD 130

  Fly    92 RSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPK 156
            :.|..::.||.:|||.||..:.|:...|:.|:|..|:|.||||||||||||.|         |.|
Zfish   131 KYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAK---------ERK 186

  Fly   157 SNAKLAQPQAEQSA 170
            .|.|..| |.:||:
Zfish   187 MNKKRLQ-QVQQSS 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	28/56 (50%)
cdx1a	NP_998001.2	Caudal_act	11..123	CDD:461413	11/56 (20%)
		Homeodomain	131..186	CDD:459649	28/63 (44%)