DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Awh

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001261379.1 Gene:Awh / 38451 FlyBaseID:FBgn0013751 Length:287 Species:Drosophila melanogaster


Alignment Length:121 Identity:39/121 - (32%)
Similarity:53/121 - (43%) Gaps:19/121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFK--SNMYLYRTRRIEIAQRLSLCERQV 134
            ||||.......|.|   |.||.||.||..||..|:..|:  ||.......|  ||....|.:|..
  Fly   133 SSDEGCDGDGYHKS---KTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLER--IASVTGLSKRVT 192

  Fly   135 KIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSAHRGIVKRLMSYS-----QDP 185
            ::||||.|.:.||.|...:.     |:.:|:....|..  :...::||     |:|
  Fly   193 QVWFQNSRARQKKHIHAGKN-----KIREPEGSSFARH--INLQLTYSFQNNAQNP 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 22/57 (39%)
AwhNP_001261379.1 LIM1_AWH 8..61 CDD:188759
LIM2_AWH 69..123 CDD:188765
Homeodomain 149..205 CDD:459649 22/57 (39%)
Blue background indicates that the domain is not in the aligned region.

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