Protein Alignment zen and Hoxc9

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001094377.1
• Gene: Hoxc9 / 368178
• RGDID: 1595784
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 140
• Identity: 54/140 - (38%)
• Similarity: 68/140 - (48%)
• Gaps: 28/140 - (20%)

  Fly    33 GHHHDVNPIGLP--------------PNYNQMNSNPTTLNDHC-----SPQH---VHQQHVSSDE 75
            |.|:.:.|...|              |:|  |..:|..|.|..     ||:.   ...:|.....
  Rat   113 GRHYALKPDAYPGRRADCGPGDGRSYPDY--MYGSPGELRDRAPQTLPSPEADALAGSKHKEEKA 175

  Fly    76 NL-PSQP--NHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIW 137
            :| ||.|  |....| ..::.|..:|..|.:|||.||..||||.|.||.|:|:.|:|.|||||||
  Rat   176 DLDPSNPVANWIHAR-STRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW 239

  Fly   138 FQNRRMKFKK 147
            |||||||.||
  Rat   240 FQNRRMKMKK 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	33/55 (60%)
Hoxc9	NP_001094377.1	Hox9_act	1..179	CDD:461369	14/67 (21%)
		Homeodomain	193..241	CDD:459649	26/47 (55%)