Protein Alignment zen and Gsx2

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 211
• Identity: 67/211 - (31%)
• Similarity: 83/211 - (39%)
• Gaps: 88/211 - (41%)

  Fly    18 YSADPSEVKYSDLI-YGHHHDVNPIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQP 81
            :|..|.:.::...: :.|||                       |.:|||.|..|      .|.||
  Rat   109 FSPGPGDAQFCPRVSHAHHH-----------------------HHAPQHHHHHH------QPQQP 144

  Fly    82 --------------------------------------------------NHDSQRVKLKRSRTA 96
                                                              :..||....||.|||
  Rat   145 GSAAAAAAAAAAAAAAAAALGHPQHHAPVCAATTYNVSDPRRFHCLTMGGSDTSQVPNGKRMRTA 209

  Fly    97 FTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQG-----HREPK 156
            |||.||:|||.||.|||||.|.||||||..|:|.|:||||||||||:|.||:.:|     |...|
  Rat   210 FTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGASRNNHASCK 274

  Fly   157 ---SNAKLAQPQAEQS 169
               |.|..|:.:.|.|
  Rat   275 CVGSQAHYARSEDEDS 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	41/55 (75%)
Gsx2	NP_001131035.2	Homeodomain	204..260	CDD:459649	41/55 (75%)