DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and Meox1

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:XP_063125617.1 Gene:Meox1 / 363684 RGDID:1308911 Length:328 Species:Rattus norvegicus


Alignment Length:167 Identity:42/167 - (25%)
Similarity:60/167 - (35%) Gaps:41/167 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 GTAAAE----------KRPMMAVAPVNPKPDYQASQKMKTEASTNNG-----MCS--------SA 229
            ||.|.|          :|...:|.| .|:.:.:|.:.......|..|     :||        |.
  Rat   136 GTIAHETEKKLSRRKKERSGQSVVP-EPENEVEACEGGSARVPTGAGPRGWRLCSFSEFRVRCSK 199

  Fly   230 DLSEILEHLAQT--TAAPQVSTATSSTGTSTNSASSSSSGHYSYNVDLVLQSI--KQDLEAAAQA 290
            |.::  |.|.:.  ...|...|.|||..|....|       :|| ||:.|.|:  ....|..|| 
  Rat   200 DQNQ--ERLNERPFQLPPPTPTLTSSGPTQAACA-------HSY-VDVKLPSVGALNFPEGLAQ- 253

  Fly   291 WSKSKSAPILATQSWHPSSQSQVPTSVHAAPSMNLSW 327
            ...|.|:|......:|....|..|:.:  ..|.|.:|
  Rat   254 HRPSLSSPFPRASIFHTLLNSTGPSGL--GNSRNRTW 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649
Meox1XP_063125617.1 None
Blue background indicates that the domain is not in the aligned region.

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