DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and HOXD3

DIOPT Version :9

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:330 Identity:103/330 - (31%)
Similarity:134/330 - (40%) Gaps:79/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PIGLPPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENL----------PSQPNHDSQRVKLKRSR 94
            |...|......:|:..|::....|.....:..|..:|.          .|.|...|:||     |
Human   139 PAKKPKGGPNASSSSATISKQIFPWMKESRQNSKQKNSCATAGESCEDKSPPGPASKRV-----R 198

  Fly    95 TAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNA 159
            ||:||.||||||.||..|.||.|.||:|:|..|:|.|||:||||||||||:|||      .|:..
Human   199 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD------QKAKG 257

  Fly   160 KLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKMKTEASTNN- 223
            .|..| |.||..|           .|..|.||........:.|| |...|.|........|..| 
Human   258 ILHSP-ASQSPER-----------SPPLGGAAGHVAYSGQLPPV-PGLAYDAPSPPAFAKSQPNM 309

  Fly   224 -GMCS-SADLSEILEHLAQTTAAPQVST-ATSSTGTSTNSASSSSS-----GHYSYNVDLVLQSI 280
             |:.: :|.||..|.. .:..|||:... ..:|.|....||:...|     |::           
Human   310 YGLAAYTAPLSSCLPQ-QKRYAAPEFEPHPMASNGGGFASANLQGSPVYVGGNF----------- 362

  Fly   281 KQDLEAAAQAWSKSKSAPI--LATQSWHPSSQS-------QVPTSVHAAPSMNLSWGEPAAKSRK 336
               :|:.|.|     |.|:  |...| ||||.|       |:|.:.|..|.      :|......
Human   363 ---VESMAPA-----SGPVFNLGHLS-HPSSASVDYSCAAQIPGNHHHGPC------DPHPTYTD 412

  Fly   337 LSVNH 341
            ||.:|
Human   413 LSAHH 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeobox 93..146 CDD:278475 36/52 (69%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 10/57 (18%)
Antp-type hexapeptide 160..165 1/4 (25%)
Homeobox 198..250 CDD:306543 36/51 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 11/38 (29%)
DUF4074 369..430 CDD:315871 18/61 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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