DRSC/TRiP Functional Genomics Resources

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Protein Alignment zen and HOXA13

DIOPT Version :10

Sequence 1:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_000513.2 Gene:HOXA13 / 3209 HGNCID:5102 Length:388 Species:Homo sapiens


Alignment Length:163 Identity:49/163 - (30%)
Similarity:73/163 - (44%) Gaps:37/163 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HQAKVGSYSADPSEVKYSDLIYGHHHDV--------------------NPIGLPPNYNQMNSNPT 55
            ||    .|:|.|         |.||..:                    .|:|||....|..:.|.
Human   232 HQ----GYAAGP---------YHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPN 283

  Fly    56 TLND--HCSPQHVHQQHV--SSDENLPSQPNHDSQRVKLKRSRTAFTSVQLVELENEFKSNMYLY 116
            ..|.  :|..:.....|:  |:..::.|.|:..|...:.::.|..:|.|||.|||.|:.:|.::.
Human   284 GWNGQMYCPKEQAQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFIT 348

  Fly   117 RTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDI 149
            :.:|..|:...:|.||||.|||||||:|.||.|
Human   349 KDKRRRISATTNLSERQVTIWFQNRRVKEKKVI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zenNP_476793.1 Homeodomain 91..147 CDD:459649 25/55 (45%)
HOXA13NP_000513.2 HoxA13_N 85..224 CDD:463521
Homeodomain 323..379 CDD:459649 25/55 (45%)
Blue background indicates that the domain is not in the aligned region.

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