Protein Alignment zen and Vsx1

DIOPT Version :10

• Sequence 1: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Sequence 2: NP_572232.2
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 329
• Identity: 71/329 - (21%)
• Similarity: 111/329 - (33%)
• Gaps: 111/329 - (33%)

  Fly    89 KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQ--G 151
            |.:..||.|||.||.|||..||...|...:.|..::.:..|.|.::::|:||||.|::|..:  |
  Fly   394 KRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKCWG 458

  Fly   152 HREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAP---VNPKPDYQASQ 213
            |         :...||...:..:|:..:     |...|.....:...:|||   ...|...:|::
  Fly   459 H---------STKMAEYGLYGAMVRHSL-----PLPETIIKSAKEDESVAPWLLGMHKKSLEAAE 509

  Fly   214 KMKTE------------------ASTNNGMCSSADLSEIL------------------------- 235
            .:|::                  .||:|...||..:|.:|
  Fly   510 LLKSDESDRETPTSDDTNTSYSAGSTHNSPISSFSISRLLFDAPPPAAGSAGGKGHHHHHHHHKG 574

  Fly   236 EHLAQTTAAPQ-------------------------VSTATSS------TGTSTNSASSSSSG-- 267
            .|.|...|..|                         :..|.:|      .||.:.|.|.|.||
  Fly   575 HHHAHVHAQAQAHAHMLLHHQQQQQQQQQQQQHHHHLHAAENSLQQQQVAGTGSGSGSGSGSGTG 639

  Fly   268 --------HYSYNVDLVLQSIKQDLEAAAQAWSKSKSAPILATQSWHPSSQSQVPTSVHAAPSMN 324
                    |:.||....|..::|..:...|...:::.      |..|...|..  .|||.....|
  Fly   640 AGSTGPPAHHPYNQQQHLHHLQQLQQQQQQQQQQAQQ------QQQHHHHQHH--HSVHHMHHHN 696

  Fly   325 LSWG 328
            .:.|
  Fly   697 AAAG 700

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	22/55 (40%)
Vsx1	NP_572232.2	Homeodomain	395..452	CDD:459649	22/56 (39%)